Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913240.1_cds_XP_016463291.1_56426
CDS Infomation

[gene=LOC107786337] [db_xref=GeneID:107786337] [protein=TBC1 domain family member 13-like] [protein_id=XP_016463291.1] [location=join(12707..13024,14555..14677,15467..15559,15970..16074,16880..17032,18177..18275,18353..18481,19177..19356,20270..20386,30313..30477)] [gbkey=CDS]
Sequence

ATGGTTAACAAACGCGTTCCCGATTGGCTCAACAGCTCTCTCTGGTCTTCTCCTTCACCA
CAACCACCCTCAGTTCAATCTCCGTCTCCATCTCCGGCGCCGTTAAATGACGATGACGTC
GACGCTACTTCTACCCGGTCGTCTACACGCTCAGCTACTAAATCATCCGCCGTTAAATCT
CTTGGTTCGGTAAGTGGCGGAGAGTTTCCGGCGGAAAGGACAGAGGATCCGGCGGTGATT
AGAGCGGAGACTCGGCACGTGCCTGCACGCGCTAAAGCGGAAATTAGAGATCCTTTGGAT
AGTAGTAGTAATTTATACCATAGTGATGATGAAAATGGAAGTTCCGCTAGTAGTACTACG
ACATCTGCATCCGCTGCTGCTGCTGCCGCCGCTATTTCTTCAGCTGAGGATATTTCTCGT
CAAGCTCAGCTTTTTCAAGAGTTGTCAAGAAAGATTATAAATATGGGAGAAGTCAGGAGG
TTAGCATCACAAGGGATACCTGATGGAGCTGGCATTCGTGCTACAGTGTGGAAGCTACTG
TTGGGCTATTTGCCAACTGAGAAAGCGCTATGGCCAACAGAGTTGGCTAAAAAGAGGTAT
CAGTACAAACATTTTAAAGAGGAGCTTTTGATGAATCCTTCGGAGATTACGAGGAAGTTG
GAGAAGTCGGTAATTATTGACGATGAAGGAACAGAGATAGAGGACAAGGGTGTACTCCCA
AGATCAGAGATATCTCATGGAGAGCATCCTTTAAGTCTTGGGCAGAATAGCATTTGGAAT
CAGTTCTTCCAGGACACGGAAATCATTGAACAGATTGATCGGGATGTCAAGCGCACACAT
CCAGACCTGCACTTTTTCTCTGGGGACACCCCATTTGCAAAATCTAACCAGGATGCTCTG
AGGAATATACTCATTGTTTTTGCCAAACTGAATCCTGGTATAAGATATGTGCAAGGGATG
AATGAATTATTGGCTCCATTGTTCTATGTATTCAGGAATGATCCCAATGAGGAAAACGCA
GCTTCTGCGGAAGCAGACACTTTCTTCTGCTTCGTGGAGCTATTAAGTGGATTTCGTGAT
CATTTCTGTCAGCAACTTGACAATAGTGTTGTTGGAATTCGTTCTACAATTACAAAGTTA
TCGCAACTTCTGAAAGAACATGATGAAGAGCTCTGGCGGCATCTTGAAATGACCACTAAA
GTGAATCCACAGTTTTATGCATTCAGATGGATAACACTCCTTCTAACACAAGAATTCAAC
TTCGCGGACAGTCTGCTTATATGGGACACACTACTAAGTGATCCTGAAGGACCTCAGGAA
ACGTTGCTTCGAGTCTGCTGCGCTATGTTAATTATCGTACGGAGGCGTCTACTTGCTGGC
GATTTCACCTCTAATTTGAAGCTACTGCAAAATTATCCGTCTTCAAATATCAGCCACCTG
CTCTATGTAGCCAATAAACTACGTGTTAAATCAGCTGGCTAA

Peptide Sequence

PEP ID

XP_016463291.1
PEP Infomation

PREDICTED: TBC1 domain family member 13-like [Nicotiana tabacum]
Sequence

MVNKRVPDWLNSSLWSSPSPQPPSVQSPSPSPAPLNDDDVDATSTRSSTRSATKSSAVKS
LGSVSGGEFPAERTEDPAVIRAETRHVPARAKAEIRDPLDSSSNLYHSDDENGSSASSTT
TSASAAAAAAAISSAEDISRQAQLFQELSRKIINMGEVRRLASQGIPDGAGIRATVWKLL
LGYLPTEKALWPTELAKKRYQYKHFKEELLMNPSEITRKLEKSVIIDDEGTEIEDKGVLP
RSEISHGEHPLSLGQNSIWNQFFQDTEIIEQIDRDVKRTHPDLHFFSGDTPFAKSNQDAL
RNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPNEENAASAEADTFFCFVELLSGFRD
HFCQQLDNSVVGIRSTITKLSQLLKEHDEELWRHLEMTTKVNPQFYAFRWITLLLTQEFN
FADSLLIWDTLLSDPEGPQETLLRVCCAMLIIVRRRLLAGDFTSNLKLLQNYPSSNISHL
LYVANKLRVKSAG

Transcript Sequence

Gene sequence data has not been registered.